BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015A02SP1|AL426763
(998 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig828 1054 0.0
>3x_Contig828
Length = 2581
Score = 1054 bits (531), Expect = 0.0
Identities = 539/541 (99%), Gaps = 1/541 (0%)
Strand = Plus / Plus
Query: 1 gatccggatgtgtaaa-aataatttctgtgtagctgaagtgtttgttgtccttttcagtc 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2041 gatccggatgtgtaaacaataatttctgtgtagctgaagtgtttgttgtccttttcagtc 2100
Query: 60 ttaatatgtgcgtttgtttactttcttgaagatcttcatacgtatatacatgcatgaaag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2101 ttaatatgtgcgtttgtttactttcttgaagatcttcatacgtatatacatgcatgaaag 2160
Query: 120 ttttcatgatttctcgagacaagattgattatccacttcttagataggtggggtatatga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2161 ttttcatgatttctcgagacaagattgattatccacttcttagataggtggggtatatga 2220
Query: 180 ctcttgtctctttatttatwacaaataccatcttagaaggcgaatagcctattcgcccca 239
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2221 ctcttgtctctttatttattacaaataccatcttagaaggcgaatagcctattcgcccca 2280
Query: 240 tcccaagttattcttctttcattagccacgtatcgtttcttcgtttattattccgttcca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2281 tcccaagttattcttctttcattagccacgtatcgtttcttcgtttattattccgttcca 2340
Query: 300 ttctgttttatcttttgatattactaccccggatcaatttccattttccaacagcgtaca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2341 ttctgttttatcttttgatattactaccccggatcaatttccattttccaacagcgtaca 2400
Query: 360 aattgtcattatagttggaataactgaatgaagcaagaaatgttgcaaaccccttgtact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2401 aattgtcattatagttggaataactgaatgaagcaagaaatgttgcaaaccccttgtact 2460
Query: 420 cccaagcataacattactcgagtggacaatactttgccctttaatggacctagattcggc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2461 cccaagcataacattactcgagtggacaatactttgccctttaatggacctagattcggc 2520
Query: 480 tctaaaccgaaatttcagttcccaccgcagaatacgaattccgaaagtccttgtaaatca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2521 tctaaaccgaaatttcagttcccaccgcagaatacgaattccgaaagtccttgtaaatca 2580
Query: 540 c 540
|
Sbjct: 2581 c 2581
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8235
Number of Sequences: 1807
Number of extensions: 8235
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 998
length of database: 10,358,551
effective HSP length: 16
effective length of query: 982
effective length of database: 10,329,639
effective search space: 10143705498
effective search space used: 10143705498
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)